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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015863688.1_cds_XP_016515766.1_28078
CDS Infomation

[gene=LOC107832436] [db_xref=GeneID:107832436] [protein=exopolygalacturonase-like] [protein_id=XP_016515766.1] [location=join(11257..11388,12143..12451,12549..12617,12764..13276,13792..14034)] [gbkey=CDS]
Sequence

ATGGCTTCAATTTCTAGTTTCGGAATAGCCTTTGTATTATGCCTTATTCTTAGGTACAGT
AGTGCAGAGGAGAAGCTCTTCAATGTCCAATCCTATGGTGCTAAAGCAGATGGAAAGACA
GATAATAGTAAGGCATTCTTGAGTACTTGGAAGGATGCATGCCAATGGAATGGAACATCC
AAATTCTTGATACCTTCAGGGGAATATATGGTATATGCTGCAATTTTTATTGGACCATGC
AGTGGATCCATGACCTTCCAAATCCAAGGGGTTGTTAAAGCTCCAACAGATCCTTCTCTA
TTCTGCAATTCGACTTGGATTTCCTTTCAATATGTAAATGGCTTAGAGATTGAAGGAGGC
GGAACTTTAGATGGACAAGGGGCTTCAGCTTGGCCTTATTTTGATACTTCCAAGAATTCT
AACTGCCCAACCCTTCCTGTTCATATCGATAATTTGATTAAATCTAGTCTCGCCGTAAAA
GTGCATTTACGATATTACTCAATCATAGAGACACTGAAATTAGATTTTATCAAAAATGCG
GTGGTGCACGACATACATTCAATCAATAGCAAGAGTTTCCATTTCGACCTCTTTAAGTGT
AATAACGTGACATTTAGTCATGTTAACCTAACCGCACCAGGCGACAGCCCTAACACCGAC
GGCATTCACATGGGCGTCTCCACCAATATCCAAGTTTTGGATTCCAACATTGGCACCGGA
GACGATTGTATATCTATGATCAACGGCAGCCAAAGCATCAACATTTCAGGGATCACTTGT
GGCCCTGGCCATGGAATAAGCATCGGAAGCTTAGGGAAGACACAAAATGAAGTCGTCACA
GACATACATGTCAAAAATTGCACTCTCATTTCTACTCAAAATGGCGCCAGGATTAAGACT
TGGGCACCATCGGAGTCTGGTAGTGCCACAAGTATAAATTTTGAGGATATTTTCATGGAT
AATGTTAGAAATCCTATCATTATTGATCAGCACTATTGTCCATCGCCTCCTTGCAGCAGT
GAGGCGAGCTCAGTGCAAATCAAGGACGTGACATTCAATAACATAAGAGGAACTTCAAGT
TCAGTGGAAGCTGTTACTTTGAATTGCAGTGCTTCATTTCCTTGCCAAGGAATCAACCTT
ACTGAAATCAATTTGGTATACAATGGCGCTGGTGGACCCGCTATCTCGTCATGTGATAAT
GCCCAAGGGACTGCCACCGGCATGGAGTTGCCTCCAAGTTGTTTAAAATCGTCTCTTGAT
TCATGA

Peptide Sequence

PEP ID

XP_016515766.1
PEP Infomation

PREDICTED: exopolygalacturonase-like [Nicotiana tabacum]
Sequence

MASISSFGIAFVLCLILRYSSAEEKLFNVQSYGAKADGKTDNSKAFLSTWKDACQWNGTS
KFLIPSGEYMVYAAIFIGPCSGSMTFQIQGVVKAPTDPSLFCNSTWISFQYVNGLEIEGG
GTLDGQGASAWPYFDTSKNSNCPTLPVHIDNLIKSSLAVKVHLRYYSIIETLKLDFIKNA
VVHDIHSINSKSFHFDLFKCNNVTFSHVNLTAPGDSPNTDGIHMGVSTNIQVLDSNIGTG
DDCISMINGSQSINISGITCGPGHGISIGSLGKTQNEVVTDIHVKNCTLISTQNGARIKT
WAPSESGSATSINFEDIFMDNVRNPIIIDQHYCPSPPCSSEASSVQIKDVTFNNIRGTSS
SVEAVTLNCSASFPCQGINLTEINLVYNGAGGPAISSCDNAQGTATGMELPPSCLKSSLD
S

Transcript Sequence

Gene sequence data has not been registered.